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  • 21 Aug, 2019

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File:ELLIPTICAL GENETIC CODE Ian.png

First position - dashed. Second position - solid.

The strongest components (bias) for the encoding of amino acid residues are, in order:

C in 2nd position = small size, medium hydropathy

U in 2nd position = average size, hydrophobic

A in 2nd position = average size, hydrophilic

U in 1st position = not hydrophilic

The y-axis is accurate (cubic Ångströms (ų)), but the x-axis could have some error from estimates of hydropathy.

Redrawn from Figure 4 in Genetic Algorithms and Recursive Ensemble Mutagenesis in Protein Engineering, which attributes the graph to Yang, M. M., W. J. Coleman and D. C. Youvan. 1990. In Reaction Centers of Photosynthetic Bacteria. M.-E. Michel-Beyerle. (Ed.) (Springer-Verlag, Germany) p209-218; listed by Google at [1]

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Derived from https://commons.wikimedia.org/key/File:Hydropathy_Molar_Volume_Genetic_Code_2.png A codon position is biased if the elliptical trace is: 1) not centered on the center of the (square) graph frame, and / or 2) contains a smaller-than-random volume. First position - dashed. Second position - solid. The strongest components (bias) for the encoding of anino acid residues are, in order: C in 2nd position = small size, medium hydropathy U in 2nd position = average size, hydrophobic A in 2nd position = average size, hydrophilic U in 1st position = not hydrophilic The y-axis is accurate (cubic Angstroms), but the x-axis could have some error from estimates of hydropathy. Redrawn from Figure 4 in http://www.complexity.org.au/ci/vol01/fullen01/html/ archive copy at the Wayback Machine which attributes the graph to Yang, M. M., W. J. Coleman and D. C. Youvan. 1990. In Reaction Centers of Photosynthetic Bacteria. M.-E. Michel-Beyerle. (Ed.) (Springer-Verlag, Germany) p209-218; listed by Google at [1] Date 30 May 2008 Source doug youvan Author Doug Youvan

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Date/TimeThumbnailDimensionsUserComment
current07:26, 22 December 2023Thumbnail for version as of 07:26, 22 December 20237,380 × 6,660 (2.5 MB)BeaoCropped 18 % horizontally, 26 % vertically using CropTool with lossless mode. Removed border.
11:57, 21 February 2015Thumbnail for version as of 11:57, 21 February 20159,000 × 9,000 (2.58 MB)Adrian J. HunterNew version by Frank Layden, discussed at my talk page at Wikipedia (en:User_talk:Adrian_J._Hunter#Genetic_Code_Expanded_Image). Restores the "NXN" labels. Copied straight from the now-redundant File:GENETIC CODE Ian2.png.
03:37, 5 February 2015Thumbnail for version as of 03:37, 5 February 20159,000 × 9,000 (2.51 MB)Frank LaydenUser created page with UploadWizard

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