Ruili Botanical Garden
Research
Working with China National GeneBank, BGI and the Forestry Bureau of Ruili, the Botanical Garden is carrying out the Digitalization of Ruili Botanic Garden project, committed to protecting endangered and Chinese endemic plants, by collection, long-term preservation and breeding of germplasm resources. Moreover, the project will carry out the world’s very first comprehensive digitalization and in-depth bioinformatics analysis of a botanical garden. Providing insight into the feasibility and technical requirements for “planetary scale” sequencing projects such as the Earth BioGenome Project (EBP) and 10,000 Plant Genome (10KP) Projects. So far 689 species and 761 specimens have been sequenced with an average depth of 60X to produce 54 Tb of raw sequencing data, and analysis and further sampling is ongoing.
References
- ^ "云南铜壁关自然保护区瑞丽植物园 - 云南生物多样性研究院". www.yabchina.org. Retrieved 2019-01-28.
- ^ "China National GeneBank". www.cngb.org. Retrieved 2019-01-28.
- ^ Liu, Xin; Xu, Xun; Huang, Ziheng; Zhao, Jianming; Liu, Jie; Mu, Ranchang; Wang, Yu; Yang, Jinlong; Sahu, Sunil Kumar (2019). "Molecular digitization of a botanical garden: high-depth whole genome sequencing of 689 vascular plant species from the Ruili Botanical Garden". GigaScience. 8 (4): giz007. doi:10.1093/gigascience/giz007. PMC 6441391. PMID 30689836.
- ^ Surridge, Chris (February 2019). "Uncommon or garden genomics". Nature Plants. 5 (2): 125. doi:10.1038/s41477-019-0372-5. ISSN 2055-0278. PMID 30737505.